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      "commit": "1e3ef49efc9a82e223f8f88f4be8afd4104a0594",
      "fileid": "027518d027525c5f9b03afd4e0dc2c5f130d55044ed50d519656350bb679e565",
      "status": "success",
      "buildurl": "https://github.com/r-universe/ktabelow/actions/runs/25653154051"
    }
  ]
}